2537 Patatin_and_cPLA2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2537 chr_2 Patatin_and_cPLA2 superfamily 1232496 1234406 + Patatin_and_cPLA2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450393 Thaps2537.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0060

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0090
 0.39

Most Highly Correlated Transcripts

6760

(Tp_sigma70.7) regulator [Rayko]
0.8613

ThpsCp134

(rpl34) ribosomal protein L34
0.8472

40001

PRK05433
0.8428

261633

(CTS2) cysS
0.8419

24505

hypothetical protein
0.8382

6028

NA
0.8286

10554

hypothetical protein
0.8273

31265

(CAT1_1) Mito_carr
0.8267

4900

hypothetical protein
0.8251

42971

valS
0.8206

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Patatin_and_cPLA2 superfamily Patatins and Phospholipases; Patatin-like phospholipase. This family consists of various patatin... - 106.54 1.26E-25 239 - 477 superfamily 264349
COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] - 70.4657 1.23E-13 229 - 543 multi-dom 227013

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45660 PHATRDRAFT_45660 229252 180135 463071 Cre09.g388763.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0045735 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0045735

nutrient reservoir activity

Details: 
Functions in the storage of nutritious substrates.
GO Category: 
MF

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