261633 (CTS2) cysS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261633 chr_3 (CTS2) cysS 114833 116847 + cysS

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0041

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0090
 0.39

Most Highly Correlated Transcripts

40034

thrS
0.9161

268398

PRK04173
0.9116

268256

PLN02346
0.9013

6028

NA
0.9012

26726

(ITS2) PLN02843
0.8967

40028

PLN02286
0.8906

39606

PRK05431
0.8898

6010

AP_muniscins_like_MHD
0.886

24832

hypothetical protein
0.8859

ThpsCp134

(rpl34) ribosomal protein L34
0.8803

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CysRS_core catalytic core domain of cysteinyl tRNA synthetase; Cysteinyl tRNA synthetase (CysRS) catalytic... cl00015 300.265 9.53E-98 152 - 473 specific 173899
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 300.265 9.53E-98 152 - 473 superfamily 260139
cysS cysteinyl-tRNA synthetase; Validated - 521.976 2.94E-180 150 - 624 multi-dom 234705

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd780 PHATRDRAFT_bd780 274773 327624 Not available Cre01.g069472.t1.1 AT2G31170.1 Not available

KEGG

KEGG description KEGG Pathway
Aminoacyl-tRNA biosynthesis map00970

GO Terms

GO:0004817 GO:0005524 GO:0006423 -

GO:0004817

cysteine-tRNA ligase activity

Details: 
Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006423

cysteinyl-tRNA aminoacylation

Details: 
The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO Category: 
BP

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