25395 EEP superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25395	chr_18	EEP superfamily	589836	592677	+	EEP superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443014	Thaps25395.2, Thaps25395.3, Thaps25395.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0439

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0089	0.36	110 0.00075

Most Highly Correlated Transcripts

3926 COG6 superfamily 0.9063	8489 GlcNAc superfamily 0.8998	20615 hypothetical protein 0.8995	5659 hypothetical protein 0.8974	270251 (NTT4) hypothetical protein 0.8939	9987 hypothetical protein 0.8925
921 hypothetical protein 0.8923	21259 UAA 0.8823	bd392 (bd392) DEXDc 0.8803	24137 PTEN_C2 0.88

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EEP superfamily		Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the...	-	96.2181	1.03E-21	246 - 598	superfamily	260458

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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