25419 AP_muniscins_like_MHD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25419 chr_18 AP_muniscins_like_MHD 691309 695364 + AP_muniscins_like_MHD

Synonyms

NCBI ID Ensembl Genomes exon ID
7450890 Thaps25419.2, Thaps25419.1, Thaps25419.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0382

Most Highly Correlated Transcripts

12836

EEP superfamily
0.9244

23748

hypothetical protein
0.9235

262371

AAA_12 superfamily
0.9217

27556

HSH155
0.9181

27813

Hid1 superfamily
0.9154

24828

CAP_GLY
0.9142

2145

hypothetical protein
0.9141

20865

DUF1162 superfamily
0.9114

21268

zf-CXXC
0.9113

2120

hypothetical protein
0.9059

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AP_muniscins_like_MHD Mu-homology domain (MHD) of muniscins adaptor proteins (AP) and similar proteins; This family... cl10970 292.398 2.89E-90 1005 - 1263 specific 211368
AP_MHD_Cterm superfamily C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD); This... - 292.398 2.89E-90 1005 - 1263 superfamily 264154

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43047 PHATRDRAFT_43047 239128 183737 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003918 -

GO:0003918

DNA topoisomerase type II (ATP-hydrolyzing) activity

Details: 
Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.
GO Category: 
MF

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