25558 (Tp_Myb1R_SHAQKYF10) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25558 chr_19c_29 (Tp_Myb1R_SHAQKYF10) regulator [Rayko] 231572 233741 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7444411 Thaps25558.2, Thaps25558.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0379

Most Highly Correlated Transcripts

30701

PRK05279
0.9003

264827

S_TKc
0.8961

264005

Glyco_hydrolase_16 superfamily
0.8947

36007

Aldolase_II superfamily
0.8925

38011

PKc_like superfamily
0.8918

262528

PI3Kc_like superfamily
0.8861

25456

GH99_GH71_like_2
0.8831

6630

hypothetical protein
0.8823

4267

COG0790
0.8817

25320

hypothetical protein
0.8813

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

Add comment

Log in to post comments