25892 PLN03116
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25892 chr_24 PLN03116 110253 112197 - PLN03116

Synonyms

NCBI ID Ensembl Genomes exon ID
7448933 Thaps25892.2, Thaps25892.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0015

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0204
 0.18

Most Highly Correlated Transcripts

bd1820

(bd1820) Fasciclin
0.9846

bd1160

(bd1160) Chloroa_b-bind superfamily
0.979

bd1306

(bd1306) NA
0.9729

bd1863

(bd1863) NA
0.9678

bd1645

(bd1645) tpt
0.9654

bd218

(bd218) Chloroa_b-bind superfamily
0.9638

bd1387

(bd1387) psbE
0.9588

bd1403

(bd1403) NA
0.9565

bd1342

(bd1342) psaL
0.9551

270340

hypothetical protein
0.9517

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CYPOR_like_FNR These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack... cl06868 469.495 7.75E-167 49 - 339 specific 99804
FNR_like superfamily Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a... - 469.495 7.75E-167 49 - 339 superfamily 263080
PLN03116 ferredoxin--NADP+ reductase; Provisional - 622.119 0 36 - 339 multi-dom 215586

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12813 PHATRDRAFT_12813 205285 198961 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0006118 GO:0016491 GO:0004324 GO:0015039 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004324

ferredoxin-NADP+ reductase activity

Details: 
Catalysis of the reaction: reduced ferredoxin + NADP+ = oxidized ferredoxin + NADPH + H+.
GO Category: 
MF

GO:0015039

NADPH-adrenodoxin reductase activity

Details: 
Catalysis of the reaction: oxidized adrenodoxin + NADPH + H+ = reduced adrenodoxin + NADP+.
GO Category: 
MF

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