260958 PLN02895
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260958 chr_1 PLN02895 1586764 1588574 + PLN02895

Synonyms

NCBI ID Ensembl Genomes exon ID
7445134 Thaps260958.1, Thaps260958.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0469

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0115
 0.37

Most Highly Correlated Transcripts

bd1844

(bd1844) NA
0.8988

bd1749

(bd1749) NA
0.8802

270222

0.8767

bd1891

(bd1891) COG3899
0.8172

262146

Chitin_synth_2
0.7616

1460

hypothetical protein
0.7613

bd733

(bd733) NA
0.7484

bd1770

(bd1770) NA
0.7442

23899

hypothetical protein
0.7387

bd1803

(bd1803) NA
0.7313

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-... cl03757 577.623 0 35 - 573 specific 100088
phosphohexomutase superfamily The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a... - 577.623 0 35 - 573 superfamily 261872
PLN02895 phosphoacetylglucosamine mutase - 807.325 0 13 - 589 multi-dom 215485

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_52603 PHATRDRAFT_52603 194068 201314 362575 Cre08.g379700.t1.2 AT5G18070.1 478177

KEGG

KEGG description KEGG Pathway
Amino sugar and nucleotide sugar metabolism map00520

GO Terms

GO:0005975 GO:0016868 GO:0004610 -

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0016868

intramolecular transferase activity, phosphotransferases

Details: 
Catalysis of the transfer of a phosphate group from one position to another within a single molecule.
GO Category: 
MF

GO:0004610

phosphoacetylglucosamine mutase activity

Details: 
Catalysis of the reaction: N-acetyl-alpha-D-glucosamine 1-phosphate = N-acetyl-D-glucosamine 6-phosphate.
GO Category: 
MF

Add comment

Log in to post comments