261310 COG3349Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261310	chr_2	COG3349	721343	723385	-	COG3349

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446506	Thaps261310.1, Thaps261310.2, Thaps261310.5, Thaps261310.4, Thaps261310.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0409

Most Highly Correlated Transcripts

264441 Glycos_transf_1 superfamily 0.9275	22688 hypothetical protein 0.9225	23748 hypothetical protein 0.9185	1042 hypothetical protein 0.9132	21220 KU superfamily 0.9114	12836 EEP superfamily 0.9096
40929 SrmB 0.9093	269821 S_TKc 0.9082	11461 hypothetical protein 0.9062	5066 hypothetical protein 0.9061

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG3349		Uncharacterized conserved protein [Function unknown]	-	123.299	2.29E-30	65 - 525	multi-dom	225885

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_54051	PHATRDRAFT_54051	274241	201409	453820	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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