261433 Alpha_kinaseThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261433	chr_2	Alpha_kinase	1394814	1397455	+	Alpha_kinase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443038	Thaps261433.2, Thaps261433.5, Thaps261433.3, Thaps261433.4, Thaps261433.6, Thaps261433.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0163

Most Highly Correlated Transcripts

12836 EEP superfamily 0.8955	22128 DENN 0.8919	bd1870 (bd1870) NA 0.8869	23560 hypothetical protein 0.8855	25318 AAT_I superfamily 0.8833	262619 Spc97_Spc98 0.8813
23346 hypothetical protein 0.8809	6378 hypothetical protein 0.8801	24174 DUF1336 superfamily 0.8796	8535 hypothetical protein 0.8778

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Alpha_kinase		Alpha-kinase family; This family is a novel family of eukaryotic protein kinase catalytic domains,...	cl03728	158.287	1.02E-44	57 - 266	specific	214828
Alpha_kinase superfamily		Alpha-kinase family; This family is a novel family of eukaryotic protein kinase catalytic domains,...	-	158.287	1.02E-44	57 - 266	superfamily	261852

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_34488	PHATRDRAFT_34488	277313	286289	95998	Cre17.g721850.t1.2	Not available	316115

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004674 GO:0005524 GO:0006468 -

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