261491 Melibiase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261491 chr_2 Melibiase superfamily 1762730 1765680 - Melibiase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452297 Thaps261491.1, Thaps261491.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0251

Most Highly Correlated Transcripts

264276

Vps8 superfamily
0.9202

bd137

(bd137) Motor_domain superfamily
0.9138

263483

CHD
0.912

bd894

(bd894) Peptidase_M14_like superfamily
0.9064

14527

Sugar_tr
0.8992

261056

(APB3) Adaptin_N
0.8985

37362

MCM
0.8966

9148

hypothetical protein
0.8954

1255

Nic96 superfamily
0.8945

bd1465

(bd1465) PKc_like superfamily
0.8943

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Melibiase superfamily Melibiase; Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan GH-D... - 67.7873 4.41E-12 636 - 798 superfamily 251067

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50372 PHATRDRAFT_50372 192287 325132 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004553 GO:0005975 -

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

Details: 
Catalysis of the hydrolysis of any O-glycosyl bond.
GO Category: 
MF

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

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