261539 PSP1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261539 chr_2 PSP1 2049176 2050577 - PSP1

Synonyms

NCBI ID Ensembl Genomes exon ID
7452351 Thaps261539.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0397

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0041
 0.50

Most Highly Correlated Transcripts

23704

RPE65 superfamily
0.9046

12836

EEP superfamily
0.8973

1172

hypothetical protein
0.8972

21025

hypothetical protein
0.8911

1900

hypothetical protein
0.8906

22549

hypothetical protein
0.8904

21220

KU superfamily
0.8899

5153

hypothetical protein
0.8885

21843

hypothetical protein
0.8863

2742

DUF1336 superfamily
0.8853

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PSP1 PSP1 C-terminal conserved region; This region is present in both eukaryotes and eubacteria. The... cl00770 151.47 2.45E-44 369 - 456 specific 252616
PSP1 superfamily PSP1 C-terminal conserved region; This region is present in both eukaryotes and eubacteria. The... - 151.47 2.45E-44 369 - 456 superfamily 260612

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_43996 PHATR_43996 212418 327278 Not available Not available Not available 264270

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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