261595 PLN00113Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261595	chr_2	PLN00113	2437007	2438373	-	PLN00113

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450476	Thaps261595.3, Thaps261595.2, Thaps261595.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0154

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0089	0.36	110 0.00075

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9395	9569 hypothetical protein 0.876	27048 TM_PBP1_branched-chain-AA_like superfamily 0.8602	24124 hypothetical protein 0.8582	263979 PKc_like superfamily 0.8579	264004 ATPase_P-type 0.8504
24546 hypothetical protein 0.8402	9148 hypothetical protein 0.8385	8003 PIG-L 0.8355	31132 MPP_Dbr1_N 0.8337

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00113		leucine-rich repeat receptor-like protein kinase; Provisional	-	86.8256	9.37E-19	176 - 352	multi-dom	215061

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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