261967 (Tp_Hox7) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261967 chr_3 (Tp_Hox7) regulator [Rayko] 2282287 2282661 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7443821 Thaps261967.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0353

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0026
 0.39

Most Highly Correlated Transcripts

264072

(HSF43) HSF_DNA-bind superfamily
0.8998

11399

hypothetical protein
0.894

4108

hypothetical protein
0.8907

263917

0.8907

2942

hypothetical protein
0.8851

4358

hypothetical protein
0.8845

8657

hypothetical protein
0.8768

262004

CAP_ED
0.8762

264937

hypothetical protein
0.8745

262826

DUF3608 superfamily
0.8741

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0003700 GO:0005634 GO:0006355 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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