262250 nuc_hydro superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262250 chr_4 nuc_hydro superfamily 1648806 1653521 - nuc_hydro superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443724 Thaps262250.2, Thaps262250.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0425

Most Highly Correlated Transcripts

15638

SET
0.9103

269261

hypothetical protein
0.9084

263361

CHD
0.9038

11563

hypothetical protein
0.9009

269724

PP2Cc
0.9007

19895

BTB
0.8945

261019

HECTc
0.8828

261567

TPR
0.8812

30701

PRK05279
0.881

264726

REC
0.8797

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CHD cyclase homology domain; Catalytic domains of the mononucleotidyl cyclases (MNC's), also... cl11967 86.479 9.38E-19 212 - 380 specific 143636
Nucleotidyl_cyc_III superfamily Class III nucleotidyl cyclases; Class III nucleotidyl cyclases are the largest, most diverse group... - 86.479 9.38E-19 212 - 380 superfamily 264492
nuc_hydro superfamily nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides... - 89.8669 2.49E-19 1228 - 1509 superfamily 260278
CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] - 67.5658 2.16E-12 182 - 395 multi-dom 225025

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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