262923 Peptidase_M8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262923 chr_6 Peptidase_M8 superfamily 1238440 1239303 - Peptidase_M8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442401 Thaps262923.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0411

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0073
 0.47

Most Highly Correlated Transcripts

11563

hypothetical protein
0.9255

269261

hypothetical protein
0.9059

39726

NrfG
0.8981

269705

hypothetical protein
0.8937

264726

REC
0.8891

30701

PRK05279
0.8876

19895

BTB
0.887

31069

S_TKc
0.8853

261019

HECTc
0.8834

36007

Aldolase_II superfamily
0.882

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M8 superfamily Leishmanolysin; Leishmanolysin. - 82.1466 7.52E-18 4 - 248 superfamily 267835

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0007155 GO:0016020 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0007155

cell adhesion

Details: 
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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