263033 DNA_pol_A_theta
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263033 chr_6 DNA_pol_A_theta 1965234 1967200 + DNA_pol_A_theta

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0158

Most Highly Correlated Transcripts

12836

EEP superfamily
0.9103

34590

nt_trans superfamily
0.9086

262619

Spc97_Spc98
0.9056

22603

COG3899
0.9045

21268

zf-CXXC
0.8992

21220

KU superfamily
0.8984

21791

hypothetical protein
0.8984

20865

DUF1162 superfamily
0.8983

1216

hypothetical protein
0.8961

6207

hypothetical protein
0.8933

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DNA_pol_A_theta DNA polymerase theta is a low-fidelity family A enzyme implicated in translesion synthesis and in... cl02626 425.102 1.66E-145 90 - 497 specific 176475
DNA_pol_A superfamily Family A polymerase primarily fills DNA gaps that arise during DNA repair, recombination and... - 425.102 1.66E-145 90 - 497 superfamily 261379

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 63399 Cre16.g664301.t1.1 AT4G32700.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0003887 GO:0006260 GO:0003889 GO:0003890 GO:0003891 GO:0003893 GO:0003894 GO:0003895 GO:0015999 GO:0016000 GO:0016448 GO:0016449 GO:0016450 GO:0016451 GO:0016452 GO:0019984 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0003887

DNA-directed DNA polymerase activity

Details: 
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer.
GO Category: 
MF

GO:0006260

DNA replication

Details: 
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
GO Category: 
BP

GO:0003889

NA

Details: 
NA
GO Category: 
NA

GO:0003890

NA

Details: 
NA
GO Category: 
NA

GO:0003891

NA

Details: 
NA
GO Category: 
NA

GO:0003893

NA

Details: 
NA
GO Category: 
NA

GO:0003894

NA

Details: 
NA
GO Category: 
NA

GO:0003895

NA

Details: 
NA
GO Category: 
NA

GO:0015999

NA

Details: 
NA
GO Category: 
NA

GO:0016000

NA

Details: 
NA
GO Category: 
NA

GO:0016448

NA

Details: 
NA
GO Category: 
NA

GO:0016449

NA

Details: 
NA
GO Category: 
NA

GO:0016450

NA

Details: 
NA
GO Category: 
NA

GO:0016451

NA

Details: 
NA
GO Category: 
NA

GO:0016452

NA

Details: 
NA
GO Category: 
NA

GO:0019984

NA

Details: 
NA
GO Category: 
NA

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