263301 Chitin_synth_CThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263301	chr_7	Chitin_synth_C	1865057	1867543	+	Chitin_synth_C

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450611	Thaps263301.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0493

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0219	0.41	1.2 7700

Most Highly Correlated Transcripts

263298 Chitin_synth_C 0.9873	bd1770 (bd1770) NA 0.8557	21983 hypothetical protein 0.8211	20953 Tryp_SPc 0.804	22971 hypothetical protein 0.8011	5858 hypothetical protein 0.7957
23419 M6dom_TIGR03296 0.7953	264903 (CHT1_1) GH18_chitinase-like superfamily 0.7926	262597 (FRU2) hypothetical protein 0.7891	8980 hypothetical protein 0.7885

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chitin_synth_C		C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-...	cl11394	299.993	3.66E-95	327 - 658	specific	133033
Glyco_tranf_GTA_type superfamily		Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a...	-	299.993	3.66E-95	327 - 658	superfamily	264347
nodulat_NodC		chitooligosaccharide synthase NodC; Members of this family are NodC, an N-...	-	81.3196	1.28E-16	308 - 770	multi-dom	211965

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0016758 GO:0004100 -

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