263452 Tryp_SPcThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263452	chr_8	Tryp_SPc	1045047	1046773	+	Tryp_SPc

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444934	Thaps263452.3, Thaps263452.2, Thaps263452.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0484

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0154	0.36	1900 100000

Most Highly Correlated Transcripts

bd740 (bd740) NA 0.9268	bd1803 (bd1803) NA 0.905	bd739 (bd739) NA 0.8612	25206 hypothetical protein 0.8484	bd1802 (bd1802) NA 0.8449	25207 hypothetical protein 0.8446
bd1821 (bd1821) NA 0.8387	bd1891 (bd1891) COG3899 0.8384	bd1822 (bd1822) SCP superfamily 0.8122	25091 hypothetical protein 0.8015

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Tryp_SPc superfamily		Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are...	-	222.922	4.33E-69	79 - 306	superfamily	238113
Tryp_SPc superfamily		Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are...	-	222.922	4.33E-69	79 - 306	superfamily	238113
Tryp_SPc		Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens that are...	-	222.938	4.48E-69	78 - 304	multi-dom	214473

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	161693	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004295 GO:0006508 GO:0004263 -

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