263785 (Tp_TAZ4_PHD2_ZZ2) KAT11 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263785 chr_11a (Tp_TAZ4_PHD2_ZZ2) KAT11 superfamily 369976 374645 - KAT11 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443298 Thaps263785.2, Thaps263785.1, Thaps263785.3, Thaps263785.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0242

Most Highly Correlated Transcripts

2897

NGN_Euk
0.9331

23667

hypothetical protein
0.9217

24854

hypothetical protein
0.919

261324

PLN02724
0.9111

25142

SWIRM
0.909

270120

Uup
0.9044

28004

hypothetical protein
0.8997

36007

Aldolase_II superfamily
0.8975

20627

DEXDc
0.8974

22627

hypothetical protein
0.8965

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
KAT11 superfamily Histone acetylation protein; Histone acetylation is required in many cellular processes including... - 201.489 8.63E-57 716 - 917 superfamily 261185
Bromodomain superfamily Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... - 150.943 4.37E-42 424 - 514 superfamily 261339
zf-TAZ TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... cl02660 85.1079 1.99E-19 192 - 264 specific 251111
zf-TAZ superfamily TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... - 76.2495 2.25E-16 1151 - 1228 superfamily 261396
ZnF_TAZ TAZ zinc finger, present in p300 and CBP; TAZ zinc finger, present in p300 and CBP. cl02660 76.2495 2.25E-16 1151 - 1228 specific 214717
zf-TAZ superfamily TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... - 76.2495 2.25E-16 1151 - 1228 superfamily 261396

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 317554 469732 Cre03.g189650.t1.1 AT1G79000.1 483048

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003712 GO:0005634 GO:0006355 GO:0008270 GO:0003677 GO:0003713 GO:0045449 -

GO:0003712

transcription cofactor activity

Details: 
Interacting selectively and non-covalently with a regulatory transcription factor and also with the basal transcription machinery in order to modulate transcription. Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between regulatory transcription factors and the basal transcription machinery.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0003713

transcription coactivator activity

Details: 
Interacting selectively and non-covalently with a activating transcription factor and also with the basal transcription machinery in order to increase the frequency, rate or extent of transcription. Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.
GO Category: 
MF

GO:0045449

NA

Details: 
NA
GO Category: 
NA

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