263852 SUL1Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263852	chr_12	SUL1	30928	32186	+	SUL1

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443220	Thaps263852.3, Thaps263852.2, Thaps263852.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0094

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0252	0.29	4100 240000

Most Highly Correlated Transcripts

11548 MDR8 0.936	bd1081 (bd1081) NA 0.9211	263271 0.9184	8927 hypothetical protein 0.9168	4596 hypothetical protein 0.9057	37302 Abhydrolase_5 0.9052
25864 hypothetical protein 0.9049	1594 hypothetical protein 0.9047	23263 hypothetical protein 0.9043	10750 MDR8 0.904

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sulfate_transp superfamily		Sulfate transporter family; Mutations in human SLC26A2 lead to several human diseases.	-	95.7531	4.40E-23	97 - 329	superfamily	267603
SUL1		Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	-	177.469	1.72E-50	16 - 328	multi-dom	223732

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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