263945 Patatin_and_cPLA2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263945 chr_12 Patatin_and_cPLA2 superfamily 999953 1004075 - Patatin_and_cPLA2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443203 Thaps263945.2, Thaps263945.4, Thaps263945.3, Thaps263945.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0130

Most Highly Correlated Transcripts

261448

PLN02205
0.9117

27813

Hid1 superfamily
0.9049

11617

hypothetical protein
0.9003

8535

hypothetical protein
0.8968

23092

hypothetical protein
0.8963

268606

TBCC
0.8956

269450

DEADc
0.8955

16613

S_TKc
0.8939

23051

hypothetical protein
0.893

22128

DENN
0.893

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 68.8918 1.70E-13 696 - 787 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 68.8918 1.70E-13 696 - 787 superfamily 260155
Patatin_and_cPLA2 superfamily Patatins and Phospholipases; Patatin-like phospholipase. This family consists of various patatin... - 339.378 4.66E-106 997 - 1291 superfamily 264349
RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] - 167.604 2.29E-45 1020 - 1290 multi-dom 224666

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 179876 196741 424485 Cre06.g262400.t1.1 Not available 561594

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005554 GO:0003824 GO:0045735 -

GO:0005554

NA

Details: 
NA
GO Category: 
NA

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0045735

nutrient reservoir activity

Details: 
Functions in the storage of nutritious substrates.
GO Category: 
MF

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