264362 LRR_RI superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264362 chr_16a LRR_RI superfamily 196925 198355 - LRR_RI superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449985 Thaps264362.2, Thaps264362.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0489

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0121
 0.36

Most Highly Correlated Transcripts

bd841

(bd841) Abhydrolase_6
0.8438

plastidpF

0.8383

plastid_psb28

0.8321

2818

hypothetical protein
0.8308

bd874

(bd874) NA
0.8134

261357

NAD_binding_8 superfamily
0.8107

262692

0.8102

3071

NA
0.8031

37585

MECDP_synthase
0.7993

bd1837

(bd1837) NA
0.7668

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LRR_RI superfamily Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue... - 79.7069 7.81E-17 98 - 209 superfamily 238064

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 554392

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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