264399 YafJ
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264399 chr_16b YafJ 109350 110537 + YafJ

Synonyms

NCBI ID Ensembl Genomes exon ID
7442610 Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0485

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0216
 0.36

Most Highly Correlated Transcripts

bd1802

(bd1802) NA
0.8917

bd739

(bd739) NA
0.8914

7335

hypothetical protein
0.8787

bd1877

(bd1877) NA
0.8602

bd938

(bd938) PBP2_NikA_DppA_OppA_like superfamily
0.859

7336

hypothetical protein
0.8475

bd1891

(bd1891) COG3899
0.8425

bd616

(bd616) NA
0.8317

bd1803

(bd1803) NA
0.8082

bd1822

(bd1822) SCP superfamily
0.8031

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like... cl00319 206.086 5.98E-64 42 - 309 specific 238889
Gn_AT_II superfamily Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen... - 206.086 5.98E-64 42 - 309 superfamily 260351

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12401 PHATRDRAFT_12401 141637 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

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