264413 UPF0029
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264413 chr_17 UPF0029 82862 83948 - UPF0029

Synonyms

NCBI ID Ensembl Genomes exon ID
7444168 Thaps264413.2, Thaps264413.1, Thaps264413.4, Thaps264413.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0375

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0053
 0.56

Most Highly Correlated Transcripts

2731

hypothetical protein
0.8741

270222

0.8624

19158

GRX_PICOT_like
0.8609

5641

hypothetical protein
0.8569

5631

(APS4) APS2
0.8565

6093

hypothetical protein
0.8565

25512

hypothetical protein
0.854

261863

GlcNAc superfamily
0.8522

22634

hypothetical protein
0.8521

36995

LplA
0.851

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UPF0029 superfamily Uncharacterized protein family UPF0029; Uncharacterized protein family UPF0029. - 164.955 9.47E-51 112 - 218 superfamily 250442
UPF0029 superfamily Uncharacterized protein family UPF0029; Uncharacterized protein family UPF0029. - 164.955 9.47E-51 112 - 218 superfamily 250442
COG1739 Uncharacterized conserved protein [Function unknown] - 150.155 5.60E-44 93 - 289 multi-dom 224653

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8747 PHATRDRAFT_8747 245058 196368 464790 Cre10.g448800.t1.1 AT4G38090.2 486473

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005554 -

GO:0005554

NA

Details: 
NA
GO Category: 
NA

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