264532 (CYN) PRK02866
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264532 chr_18 (CYN) PRK02866 575213 575831 - PRK02866

Synonyms

NCBI ID Ensembl Genomes exon ID
7444797 Thaps264532.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0116

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0044
 0.46

Most Highly Correlated Transcripts

bd1806

(bd1806) AAT_I superfamily
0.9006

bd1439

(bd1439) ycf35
0.8624

bd1934

(bd1934) NA
0.8325

bd1935

(bd1935) NA
0.8315

bd690

(bd690) NA
0.8251

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8193

bd1058

(bd1058) NA
0.8025

bd1946

(bd1946) NA
0.7998

bd643

(bd643) NA
0.7879

bd1787

(bd1787) GLTP
0.782

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cyanase_C superfamily Cyanase C-terminal domain. Cyanase (Cyanate lyase) is responsible for the hydrolysis of cyanate.... - 104.629 4.42E-29 121 - 193 superfamily 244809
PRK02866 cyanate hydratase; Validated - 119.538 6.51E-34 52 - 189 multi-dom 235079

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17187 PHATRDRAFT_17187 268235 309563 73978 Not available AT3G23490.1 Not available

KEGG

KEGG description KEGG Pathway
Nitrogen metabolism map00910

GO Terms

GO:0003677 GO:0008824 GO:0009439 GO:0008152 GO:0016836 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0008824

cyanate hydratase activity

Details: 
Catalysis of the reaction: cyanate + H2O = carbamate.
GO Category: 
MF

GO:0009439

cyanate metabolic process

Details: 
The chemical reactions and pathways involving cyanate, NCO-, the anion of cyanic acid.
GO Category: 
BP

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016836

hydro-lyase activity

Details: 
Catalysis of the cleavage of a carbon-oxygen bond by elimination of water.
GO Category: 
MF

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