264582 lysozyme_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264582 chr_19a_19 lysozyme_like superfamily 211535 212567 - lysozyme_like superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0444

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0087
 0.32

Most Highly Correlated Transcripts

bd153

(bd153) NA
0.9022

bd1835

(bd1835) NA
0.7746

bd1890

(bd1890) NA
0.7729

38726

hypothetical protein
0.7578

bd933

(bd933) NA
0.7565

264804

hypothetical protein
0.7542

bd630

(bd630) NA
0.7428

bd816

(bd816) NA
0.7421

bd1851

(bd1851) NA
0.7372

bd1756

(bd1756) NA
0.7347

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
lysozyme_like superfamily lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT... - 95.055 7.55E-24 37 - 214 superfamily 260275

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004568 GO:0006032 GO:0009613 GO:0016998 -

GO:0004568

chitinase activity

Details: 
Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO Category: 
MF

GO:0006032

chitin catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO Category: 
BP

GO:0009613

NA

Details: 
NA
GO Category: 
NA

GO:0016998

cell wall macromolecule catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.
GO Category: 
BP

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