264610 Prolidase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264610 chr_19b_31 Prolidase 5903 8101 + Prolidase

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0165

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0011
 0.46

Most Highly Correlated Transcripts

bd1842

(bd1842) NA
0.9308

22153

DnaJ
0.9038

23316

FtsJ
0.9028

9168

HP_HAP_like
0.9026

2742

DUF1336 superfamily
0.9017

21119

hypothetical protein
0.8981

262824

COG4581
0.8972

1197

RhaT
0.8927

263866

AAK superfamily
0.8921

1125

N2227 superfamily
0.8905

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase... cl00279 293.325 1.06E-94 299 - 573 specific 238520
APP_MetAP superfamily A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as... - 293.325 1.06E-94 299 - 573 superfamily 260321
AMP_N superfamily Aminopeptidase P, N-terminal domain; This domain is structurally very similar to the creatinase N-... - 70.3462 2.73E-14 103 - 260 superfamily 263653
PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] - 168.759 1.74E-46 155 - 577 multi-dom 223085

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_29983 PHATRDRAFT_29983 205562 235114 Not available Cre07.g342920.t1.2 AT4G29490.1 527968

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008235 GO:0004812 GO:0005524 GO:0006418 GO:0004251 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008235

metalloexopeptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0004812

aminoacyl-tRNA ligase activity

Details: 
Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006418

tRNA aminoacylation for protein translation

Details: 
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO Category: 
BP

GO:0004251

NA

Details: 
NA
GO Category: 
NA

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