1197 RhaTThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1197	chr_1	RhaT	910731	913336	-	RhaT

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445629	Thaps1197.2, Thaps1197.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0396

Most Highly Correlated Transcripts

24328 ANK 0.9158	11307 ABC_ATPase superfamily 0.9144	42646 PRK04342 0.9103	10379 hypothetical protein 0.9054	40496 EMP70 superfamily 0.9048	4482 hypothetical protein 0.9043
6087 hypothetical protein 0.9038	25373 hypothetical protein 0.9013	22128 DENN 0.901	1186 hypothetical protein 0.8986

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RhaT		Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and...	-	88.7701	2.40E-19	435 - 742	multi-dom	223769

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_44027	PHATR_44027	182079	301950	Not available	Cre02.g077061.t1.1	Not available	494151

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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