264664 TRX_familyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
264664	chr_20	TRX_family	40299	40834	-	TRX_family

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447800	Thaps264664.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0114

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0045	0.44

Most Highly Correlated Transcripts

bd1756 (bd1756) NA 0.9207	bd1839 (bd1839) NA 0.9025	bd1840 (bd1840) NA 0.897	bd1841 (bd1841) CAP10 superfamily 0.896	bd415 (bd415) arom_aa_hydroxylase superfamily 0.8821	bd1946 (bd1946) NA 0.8527
bd1439 (bd1439) ycf35 0.8396	11142 hypothetical protein 0.8392	bd1823 (bd1823) SCP superfamily 0.8168	bd1058 (bd1058) NA 0.8097

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TRX_family		TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX...	cl00388	59.1089	2.62E-12	89 - 178	specific	239245
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	59.1089	2.62E-12	89 - 178	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 -

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