264691 B9-C2Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
264691	chr_20	B9-C2	308465	309376	-	B9-C2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448523	Thaps264691.2, Thaps264691.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0303

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0031	0.36	0.00007 15000

Most Highly Correlated Transcripts

bd938 (bd938) PBP2_NikA_DppA_OppA_like superfamily 0.8496	bd616 (bd616) NA 0.8304	6633 hypothetical protein 0.8022	11484 hypothetical protein 0.7706	bd1835 (bd1835) NA 0.7664	6637 hypothetical protein 0.7609
9345 hypothetical protein 0.7534	8240 hypothetical protein 0.7365	935 hypothetical protein 0.736	11488 hypothetical protein 0.7323

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
B9-C2 superfamily		Ciliary basal body-associated, B9 protein; The B9-C2 domain is found in proteins associated with...	-	172.401	5.11E-53	110 - 274	superfamily	254085
B9-C2 superfamily		Ciliary basal body-associated, B9 protein; The B9-C2 domain is found in proteins associated with...	-	172.401	5.11E-53	110 - 274	superfamily	254085

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	222627	Cre16.g674627.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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