264718 (Tp_Myb1R3) BDP1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264718 chr_20 (Tp_Myb1R3) BDP1 superfamily 481783 483639 + BDP1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448550 Thaps264718.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0478

Most Highly Correlated Transcripts

10398

hypothetical protein
0.8685

5869

hypothetical protein
0.8624

3655

Lipase_3
0.8591

8762

SNF2_N
0.8568

21700

hypothetical protein
0.8547

11072

hypothetical protein
0.8534

7182

hypothetical protein
0.8519

31075

PDEase_I
0.8507

262616

(MYB22)
0.848

33970

rad25
0.8478

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BDP1 superfamily Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription] - 81.2978 1.74E-16 468 - 611 superfamily 227448

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42928 PHATRDRAFT_42928 234457 289562 Not available Not available Not available 526090

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

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