31075 PDEase_IThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
31075	chr_1	PDEase_I	1848332	1852576	-	PDEase_I

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449789	Thaps31075.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0477

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0014	0.46	2.6 6.6

Most Highly Correlated Transcripts

15593 RecQ 0.9158	6378 hypothetical protein 0.9091	22533 hypothetical protein 0.9036	25619 hypothetical protein 0.9027	18434 PIPKc superfamily 0.8927	bd1815 (bd1815) NA 0.8898
1172 hypothetical protein 0.8876	22087 hypothetical protein 0.8837	21410 hypothetical protein 0.8818	25172 hypothetical protein 0.8816

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CHD		cyclase homology domain; Catalytic domains of the mononucleotidyl cyclases (MNC's), also...	cl11967	91.8718	1.20E-20	1095 - 1298	specific	143636
Nucleotidyl_cyc_III superfamily		Class III nucleotidyl cyclases; Class III nucleotidyl cyclases are the largest, most diverse group...	-	91.8718	1.20E-20	1095 - 1298	superfamily	264492
PDEase_I		3'5'-cyclic nucleotide phosphodiesterase; 3'5'-cyclic nucleotide...	-	228.856	1.82E-67	344 - 562	multi-dom	109297

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	199071	Cre13.g605100.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0007242 GO:0009190 GO:0016849 -

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