26635 Aa_trans superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26635 chr_1 Aa_trans superfamily 1147612 1148969 - Aa_trans superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445020 Thaps26635.1, Thaps26635.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0405

Most Highly Correlated Transcripts

6373

hypothetical protein
0.8953

16114

PLN02350
0.8636

5340

hypothetical protein
0.8625

261400

NA
0.8607

2660

hypothetical protein
0.8578

24548

hypothetical protein
0.8572

6698

hypothetical protein
0.852

39241

Ras_like_GTPase superfamily
0.8519

262467

MFS
0.8489

1244

hypothetical protein
0.8455

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Aa_trans superfamily Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid... - 207.921 2.32E-62 4 - 385 superfamily 266708
SdaC Amino acid permeases [Amino acid transport and metabolism] - 100.033 1.18E-23 3 - 373 multi-dom 223884

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40517 PHATRDRAFT_40517 158614 162131 195046 Not available AT2G42005.1 352935

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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