267979 HCO3_cotransp superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
267979 chr_1 HCO3_cotransp superfamily 975210 976948 - HCO3_cotransp superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps267979.2, Thaps267979.4, Thaps267979.3, Thaps267979.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0043

Most Highly Correlated Transcripts

23951

hypothetical protein
0.954

25512

hypothetical protein
0.9395

22627

hypothetical protein
0.9381

21922

hypothetical protein
0.9381

3058

WD40 superfamily
0.9379

38258

ATM1
0.9377

262088

CHD
0.9345

42533

N2227 superfamily
0.9337

24790

Nitro_FMN_reductase superfamily
0.9323

1302

hypothetical protein
0.9316

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HCO3_cotransp superfamily HCO3- transporter family; This family contains Band 3 anion exchange proteins that exchange CL-/... - 263.002 3.49E-81 1 - 438 superfamily 250251

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43194 PHATRDRAFT_43194 232807 317492 99943 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005452 GO:0006820 GO:0016020 GO:0015380 GO:0016021 -

GO:0005452

inorganic anion exchanger activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion A(out) + inorganic anion B(in) = inorganic anion A(in) + inorganic anion B(out).
GO Category: 
MF

GO:0006820

anion transport

Details: 
The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0015380

NA

Details: 
NA
GO Category: 
NA

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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