268084 SKIP_SNW
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268084 chr_1 SKIP_SNW 2088320 2090310 + SKIP_SNW

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0382

Most Highly Correlated Transcripts

31822

WD40
0.9105

13448

Sec1
0.8957

11085

hypothetical protein
0.8913

269450

DEADc
0.8899

19059

SynMuv_product superfamily
0.8895

24874

hypothetical protein
0.8885

22407

hypothetical protein
0.8872

24525

hypothetical protein
0.8858

27556

HSH155
0.8817

2703

CDC73 superfamily
0.8808

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SKIP_SNW superfamily SKIP/SNW domain; This domain is found in chromatin proteins. - 220.249 8.31E-69 193 - 353 superfamily 251500
SKIP_SNW superfamily SKIP/SNW domain; This domain is found in chromatin proteins. - 220.249 8.31E-69 193 - 353 superfamily 251500

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_26061 PHATRDRAFT_26061 195218 185710 443181 Cre01.g051100.t1.2 AT1G77180.2 362123

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

GO:0005634 -

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

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