268124 COG0429
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268124 chr_1 COG0429 2624695 2626237 - COG0429

Synonyms

NCBI ID Ensembl Genomes exon ID
7445090 Thaps268124.1, Thaps268124.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0107

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0081
 0.42

Most Highly Correlated Transcripts

bd1813

(bd1813) NA
0.9449

270222

0.9051

36649

SufE superfamily
0.8928

268054

hypothetical protein
0.8898

bd692

(bd692) NA
0.8896

6323

hypothetical protein
0.8811

7006

hypothetical protein
0.8763

37934

GRX_PICOT_like
0.8714

26991

GRX_GRXh_1_2_like
0.8706

11214

SOUL
0.866

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Hydrolase_4 superfamily Putative lysophospholipase; This domain is found in bacteria and eukaryotes and is approximately... - 110.047 3.79E-27 86 - 430 superfamily 267493
COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] - 175.222 5.48E-50 88 - 461 multi-dom 223506

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10718 PHATRDRAFT_10718 223100 224040 Not available Cre12.g532200.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

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