268548 alcohol_DH_class_III
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268548 chr_3 alcohol_DH_class_III 1909489 1912047 - alcohol_DH_class_III

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0411

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0076
 0.36

Most Highly Correlated Transcripts

10510

hypothetical protein
0.8601

6648

hypothetical protein
0.8108

23780

hypothetical protein
0.8092

24874

hypothetical protein
0.7994

263755

S_TKc
0.7966

264732

0.7956

5875

hypothetical protein
0.795

35206

hypothetical protein
0.7947

27556

HSH155
0.7938

11213

PhyH superfamily
0.7924

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
alcohol_DH_class_III class III alcohol dehydrogenases; Members identified as glutathione-dependent formaldehyde... cl16912 702.062 0 292 - 663 specific 176260
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 702.062 0 292 - 663 superfamily 266485
PLN02442 superfamily S-formylglutathione hydrolase - 330.586 7.43E-108 1 - 267 superfamily 178061
AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] - 515.234 1.70E-178 292 - 664 multi-dom 223990
COG0627 Predicted esterase [General function prediction only] - 241.579 1.75E-73 7 - 269 multi-dom 223700

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0008270 GO:0016491 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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