268560 FNR_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268560 chr_3 FNR_like superfamily 2096565 2098916 + FNR_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443781 Thaps268560.1, Thaps268560.3, Thaps268560.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0160

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0036
 0.41

Most Highly Correlated Transcripts

12836

EEP superfamily
0.8938

bd874

(bd874) NA
0.8847

bd392

(bd392) DEXDc
0.8699

1079

hypothetical protein
0.8679

22928

hypothetical protein
0.8675

22533

hypothetical protein
0.8673

5614

hypothetical protein
0.8643

23339

hypothetical protein
0.8633

1101

hypothetical protein
0.8613

21791

hypothetical protein
0.8612

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FNR_like superfamily Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a... - 267.602 266 - 720 superfamily 263080
Flavodoxin_1 cl00438 64.3297 80 - 180 specific 249722
FMN_red superfamily - 64.3297 80 - 180 superfamily 260423

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43649 PHATRDRAFT_43649 269392 204414 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0016491 GO:0010181 GO:0003958 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0010181

FMN binding

Details: 
Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
GO Category: 
MF

GO:0003958

NADPH-hemoprotein reductase activity

Details: 
Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein.
GO Category: 
MF

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