268593 COG3899Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
268593	chr_4	COG3899	145701	148281	-	COG3899

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442041	Thaps268593.3, Thaps268593.4, Thaps268593.2, Thaps268593.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0448

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0055	0.46	0.0012 1.3

Most Highly Correlated Transcripts

264262 COG3899 0.8858	11371 hypothetical protein 0.8748	37638 HrpA 0.8721	23952 hypothetical protein 0.8702	21655 hypothetical protein 0.8657	24943 COG3899 0.8624
6768 DUF726 superfamily 0.8609	24018 hypothetical protein 0.8579	21463 hypothetical protein 0.8575	8797 hypothetical protein 0.8566

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG3899		Predicted ATPase [General function prediction only]	-	199.161	1.19E-54	2 - 599	multi-dom	226415

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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