268895 (SIT1) Silic_transp superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268895 chr_5 (SIT1) Silic_transp superfamily 1169047 1170722 - Silic_transp superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450065 Thaps268895.1, Thaps268895.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0376

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0135
 0.41

Most Highly Correlated Transcripts

9619

hypothetical protein
0.8705

41392

(SIT2) Silic_transp superfamily
0.8593

bd415

(bd415) arom_aa_hydroxylase superfamily
0.859

4108

hypothetical protein
0.8515

bd1787

(bd1787) GLTP
0.8497

bd1959

(bd1959) NA
0.8447

bd1941

(bd1941) NA
0.8377

21968

hypothetical protein
0.8313

bd1808

(bd1808) NA
0.8268

bd721

(bd721) NA
0.825

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Silic_transp superfamily Silicon transporter; Silicon transporter. - 780.964 0 1 - 461 superfamily 146463

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23423 PHATRDRAFT_23423 Not available 261458 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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