268976 Peptidase_A22B superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268976 chr_5 Peptidase_A22B superfamily 2181611 2183415 - Peptidase_A22B superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0497

Most Highly Correlated Transcripts

270222

0.8926

23150

FAAL
0.8713

5604

hypothetical protein
0.8692

13065

(CAT1_2) Carn_acyltransf superfamily
0.8684

12836

EEP superfamily
0.8636

21613

hypothetical protein
0.8599

bd877

(bd877) NA
0.8585

23776

S_TKc
0.8528

bd692

(bd692) NA
0.8476

21307

hypothetical protein
0.8474

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_A22B superfamily Signal peptide peptidase; The members of this family are membrane proteins. In some proteins this... - 203.523 4.05E-61 27 - 357 superfamily 260890

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9388 PHATRDRAFT_9388 150733 322463 467266 Not available AT2G29900.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0007242 GO:0016021 GO:0004190 GO:0009049 GO:0042499 GO:0042500 -

GO:0007242

NA

Details: 
NA
GO Category: 
NA

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0004190

aspartic-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
GO Category: 
MF

GO:0009049

NA

Details: 
NA
GO Category: 
NA

GO:0042499

NA

Details: 
NA
GO Category: 
NA

GO:0042500

aspartic endopeptidase activity, intramembrane cleaving

Details: 
Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain, occurring within the plasma membrane.
GO Category: 
MF

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