268980 COG0428
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268980 chr_5 COG0428 2224262 2225619 - COG0428

Synonyms

NCBI ID Ensembl Genomes exon ID
7447214 Thaps268980.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0457

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0027
 0.38

Most Highly Correlated Transcripts

bd687

(bd687) NA
0.938

35728

FtsZ_type1
0.9214

20618

hypothetical protein
0.8912

bd719

(bd719) NA
0.8871

36007

Aldolase_II superfamily
0.8844

16295

FBPase
0.8838

38964

Chorismate_synthase
0.8758

4524

DHQS
0.8732

264556

FBPase
0.8727

25399

hypothetical protein
0.8717

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] cl00437 86.6412 1.24E-20 34 - 221 specific 223505
Zip superfamily ZIP Zinc transporter; The ZIP family consists of zinc transport proteins and many putative metal... - 86.6412 1.24E-20 34 - 221 superfamily 260422

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49400 PHATRDRAFT_49400 203199 213300 Not available Cre06.g281900.t1.2 AT3G08650.1 548600

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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