269060 Arginase_HDAC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269060 chr_6 Arginase_HDAC superfamily 730902 734367 + Arginase_HDAC superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0255
 0.31

Most Highly Correlated Transcripts

8990

DAP2
0.926

4502

hypothetical protein
0.9231

29867

(ACS2_1) PLN02736
0.9104

20664

hypothetical protein
0.8955

11747

hypothetical protein
0.8934

261908

PLN02889
0.8927

11294

XendoU
0.892

9388

hypothetical protein
0.8908

11750

VPS9
0.889

25363

Zw10 superfamily
0.8887

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 102.847 2.59E-25 258 - 360 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 102.847 2.59E-25 258 - 360 superfamily 238125
Arginase_HDAC superfamily Arginase-like and histone-like hydrolases; Arginase-like/histone-like hydrolase superfamily... - 289.797 1.77E-90 417 - 790 superfamily 266496
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 76.5259 1.62E-16 264 - 348 multi-dom 257303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45431 PHATRDRAFT_45431 Not available 263567 461310 Not available Not available 562727

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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