269097 TAF12
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
269097 chr_6 TAF12 1043700 1045334 - TAF12
NCBI ID Ensembl Genomes exon ID
7445966 Thaps269097.2, Thaps269097.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0408
0.9302
WD40
0.9199
Methyltransf_6 superfamily
0.9127
PRK05279
0.9113
nt_trans superfamily
0.9005
TRX_reduct
0.8968
SIR2 superfamily
0.893
STKc_CDC2L1
0.8837
0.8835
hypothetical protein
0.8832
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TAF12 TATA Binding Protein (TBP) Associated Factor 12 (TAF12) is one of several TAFs that bind TBP and is... cl17384 92.6611 5.55E-23 372 - 439 specific 173964
TAF12 superfamily TATA Binding Protein (TBP) Associated Factor 12 (TAF12) is one of several TAFs that bind TBP and is... - 92.6611 5.55E-23 372 - 439 superfamily 266659
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47054 PHATRDRAFT_47054 254072 287240 194075 Not available AT1G17440.2 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0005669 GO:0006352 GO:0003677 GO:0004402 -

transcription factor TFIID complex

Details: 
A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters.
GO Category: 
CC

DNA-templated transcription, initiation

Details: 
Any process involved in the assembly of the RNA polymerase preinitiation complex (PIC) at the core promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. The initiation phase ends just before and does not include promoter clearance, or release, which is the transition between the initiation and elongation phases of transcription.
GO Category: 
BP

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

histone acetyltransferase activity

Details: 
Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.
GO Category: 
MF
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