269113 M3_likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
269113	chr_6	M3_like	1159009	1160810	-	M3_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445990	Thaps269113.3, Thaps269113.2, Thaps269113.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0048	0.39	71000 7300

Most Highly Correlated Transcripts

263399 CypX 0.9214	3483 hypothetical protein 0.9163	21168 hypothetical protein 0.9106	267948 NAD_binding_8 superfamily 0.9039	2944 hypothetical protein 0.9025	2862 HA 0.9004
6452 hypothetical protein 0.8998	25719 hypothetical protein 0.8965	21887 hypothetical protein 0.8965	11187 hypothetical protein 0.8963

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
M3_like		Peptidase M3-like family, a zincin metallopeptidase, includes M3 and M32 families; The peptidase M3...	cl14813	364.397	4.27E-121	73 - 456	specific	188993
GluZincin superfamily		Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4...	-	364.397	4.27E-121	73 - 456	superfamily	265459

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	188090	235748	454829	Cre01.g023350.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004222 GO:0006508 -

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