269169 Beach
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269169 chr_6 Beach 1650959 1653388 + Beach

Synonyms

NCBI ID Ensembl Genomes exon ID
7444570 Thaps269169.3, Thaps269169.1, Thaps269169.2, Thaps269169.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474

Most Highly Correlated Transcripts

5309

Methyltransf_31
0.9256

7921

MinC_C superfamily
0.9243

10487

hypothetical protein
0.9221

24947

zf-DHHC
0.918

11461

hypothetical protein
0.9164

12836

EEP superfamily
0.9099

13448

Sec1
0.9081

1676

hypothetical protein
0.9071

23560

hypothetical protein
0.9058

6823

COG2 superfamily
0.9056

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a... cl10511 341.53 1.70E-111 382 - 672 specific 100117
Beach superfamily BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a... - 341.53 1.70E-111 382 - 672 superfamily 263990

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9886 PHATRDRAFT_9886 187717 193283 Not available Cre06.g274950.t1.1 Not available 545146

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments