269475 SIR2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269475 chr_10 SIR2 superfamily 114437 115938 + SIR2 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0496

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0056
 0.44

Most Highly Correlated Transcripts

270222

0.8705

bd1877

(bd1877) NA
0.8609

7335

hypothetical protein
0.8367

bd1891

(bd1891) COG3899
0.8349

bd938

(bd938) PBP2_NikA_DppA_OppA_like superfamily
0.7983

bd1692

(bd1692) NA
0.798

bd1487

(bd1487) PLN02688
0.7915

bd739

(bd739) NA
0.7879

bd1802

(bd1802) NA
0.7848

263554

SK
0.7733

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SIR2 superfamily SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze... - 231.807 1.10E-75 46 - 270 superfamily 260250

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_52135 PHATR_52135 267362 154796 107631 Cre10.g462200.t1.2 AT5G55760.1 506237

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005677 GO:0006342 GO:0006355 GO:0003956 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005677

chromatin silencing complex

Details: 
Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing.
GO Category: 
CC

GO:0006342

chromatin silencing

Details: 
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
GO Category: 
BP

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0003956

NAD(P)+-protein-arginine ADP-ribosyltransferase activity

Details: 
Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine.
GO Category: 
MF

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