269624 TIM_phosphate_binding superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269624 chr_12 TIM_phosphate_binding superfamily 565528 566634 - TIM_phosphate_binding superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps269624.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0018

Most Highly Correlated Transcripts

40097

EMP24_GP25L
0.9444

3180

hypothetical protein
0.9427

34996

(Cdc37) CDC37_C
0.9424

887

Bromodomain superfamily
0.9385

3051

hypothetical protein
0.9369

23249

ETC_C1_NDUFA4 superfamily
0.936

41694

hypothetical protein
0.9357

24584

hypothetical protein
0.934

6093

hypothetical protein
0.9333

26002

2Fe-2S_thioredx
0.9313

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 73.7635 2.33E-15 113 - 263 superfamily 266538

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_35057 PHATRDRAFT_35057 273296 194204 204730 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004425 GO:0006568 -

GO:0004425

indole-3-glycerol-phosphate synthase activity

Details: 
Catalysis of the reaction: 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = 1-(indol-3-yl)glycerol 3-phosphate + CO2 + H2O.
GO Category: 
MF

GO:0006568

tryptophan metabolic process

Details: 
The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.
GO Category: 
BP

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