269820 2A43
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269820 chr_15 2A43 307130 309343 + 2A43

Synonyms

NCBI ID Ensembl Genomes exon ID
7441986 Thaps269820.2, Thaps269820.4, Thaps269820.1, Thaps269820.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0470

Most Highly Correlated Transcripts

21090

hypothetical protein
0.9264

16114

PLN02350
0.9151

18392

RabGAP-TBC
0.9094

19158

GRX_PICOT_like
0.9

25512

hypothetical protein
0.8977

36995

LplA
0.8976

8798

CHD
0.8948

13448

Sec1
0.8945

40200

TRX_reduct
0.888

268737

hypothetical protein
0.8856

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PQ-loop PQ loop repeat; Members of this family are all membrane bound proteins possessing a pair of repeats... cl17546 66.7963 7.72E-14 359 - 414 specific 252442
PQ-loop superfamily PQ loop repeat; Members of this family are all membrane bound proteins possessing a pair of repeats... - 66.7963 7.72E-14 359 - 414 superfamily 266743
2A43 Lysosomal Cystine Transporter; [Transport and binding proteins, Amino acids, peptides and amines]. - 135.753 7.04E-37 219 - 458 multi-dom 130026

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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