269927 DUF2453Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
269927	chr_18	DUF2453	30063	31279	+	DUF2453

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450921	Thaps269927.3, Thaps269927.2, Thaps269927.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0025

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0054	0.44	0.00000000000079 0.044

Most Highly Correlated Transcripts

8067 Na_Ca_ex 0.8473	270222 0.8321	11299 hypothetical protein 0.8298	27048 TM_PBP1_branched-chain-AA_like superfamily 0.8294	261357 NAD_binding_8 superfamily 0.8215	5671 hypothetical protein 0.819
260936 HCO3_cotransp superfamily 0.8175	264326 probable cytochrome P450 0.8118	24124 hypothetical protein 0.8112	9262 hypothetical protein 0.8097

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF2453 superfamily		Protein of unknown function (DUF2453); Some members of this family are purported to contain GAF...	-	107.419	1.36E-28	1 - 113	superfamily	151064
DUF2453 superfamily		Protein of unknown function (DUF2453); Some members of this family are purported to contain GAF...	-	107.419	1.36E-28	1 - 113	superfamily	151064

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_44147	PHATR_44147	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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